Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cacna1fb ENSDARG00000023683

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Description

calcium channel, voltage-dependent, L type, alpha 1F subunit [Source:ZFIN;Acc:ZDB-GENE-031104-1]

Gene Synonyms

ZfCav1.4, cacna1f

Location

Chromosome 8: 22,851,472-22,927,224 forward strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 178 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000041564.7	cacna1fb-201	7710	2065aa	ENSDARP00000041563.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134151.2	cacna1fb-202	4835	1612aa	ENSDARP00000121451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2C1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000136403.2	cacna1fb-203	1032	313aa	ENSDARP00000120225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCR5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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