Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rab5aa ENSDARG00000018602

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Description

RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]

Gene Synonyms

fj38g08, hm:zehn1144, rab5a, wu:fj38g08

Location

Chromosome 19: 20,708,460-20,722,368 forward strand.

GRCz11:CM002903.2

About this gene

This gene has 3 transcripts (splice variants), 182 orthologues and 88 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034124.8	rab5aa-201	2592	216aa	ENSDARP00000032505.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129730.2	rab5aa-202	683	216aa	ENSDARP00000107354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUW5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142127.2	rab5aa-203	691	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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