Gene: pabpc1a ENSDARG00000017219

Description

poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]

Gene Synonyms

pabpc1, wu:fb16a02, wu:fc31e01, wu:fi19b08, wu:fj12d09, wu:fj61f06, zgc:109879

Location

Chromosome 16: 54,829,284-54,851,247 forward strand.

GRCz11:CM002900.2

About this gene

This gene has 6 transcripts (splice variants), 128 orthologues, 28 paralogues and is associated with 22 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000024729.9	pabpc1a-201	2554	634aa	ENSDARP00000021064.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB54	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148392.2	pabpc1a-202	2033	634aa	ENSDARP00000124828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB54	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149449.2	pabpc1a-205	747	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000149603.3	pabpc1a-206	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000149264.2	pabpc1a-204	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000149119.2	pabpc1a-203	330	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Gene: pabpc1a ENSDARG00000017219

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: pabpc1a ENSDARG00000017219

Summary

About Us

Get help

Our sister sites

Follow us