Gene: hnrnpr ENSDARG00000014569

Description

heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]

Gene Synonyms

hnrpr, wu:cegs2571, wu:fb97a09, wu:fe01h03, zgc:56523

Location

Chromosome 19: 72,661-82,516 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 6 transcripts (splice variants), 224 orthologues, 28 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159815.3	hnrnpr-202	4165	637aa	ENSDARP00000134461.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IHZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000160560.3	hnrnpr-203	2649	631aa	ENSDARP00000137219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITI5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000166009.2	hnrnpr-205	936	159aa	ENSDARP00000133587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IHN8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000172319.2	hnrnpr-206	851	269aa	ENSDARP00000139065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITR2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000027864.9	hnrnpr-201	848	230aa	ENSDARP00000016984.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PBZ5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000165328.2	hnrnpr-204	817	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: hnrnpr ENSDARG00000014569

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Gene: hnrnpr ENSDARG00000014569

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