Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: eif3ja ENSDARG00000012603

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Description

eukaryotic translation initiation factor 3, subunit Ja [Source:NCBI gene;Acc:394189]

Gene Synonyms

eif3j, eif3s1, fb48g07, wu:fb48g07, zgc:63801

Location

Chromosome 25: 31,900,825-31,907,672 reverse strand.

GRCz11:CM002909.2

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149471.3	eif3ja-201	1802	249aa	ENSDARP00000124801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RA22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149707.2	eif3ja-202	703	229aa	ENSDARP00000124381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3K1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000150236.2	eif3ja-203	725	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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