Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rapgef6 ENSDARG00000010945

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Description

Rap guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6972]

Gene Synonyms

wu:fa12b02

Location

Chromosome 21: 45,041,684-45,086,170 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 6 transcripts (splice variants), 207 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000181525.1	rapgef6-203	3786	1261aa	ENSDARP00000156904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RZT1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000187268.1	rapgef6-204	3681	1226aa	ENSDARP00000150102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QE20	-
ENSDART00000181390.1	rapgef6-202	3258	1085aa	ENSDARP00000147159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q214	-
ENSDART00000191003.1	rapgef6-206	3126	1041aa	ENSDARP00000153434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QLM3	-
ENSDART00000188963.1	rapgef6-205	1818	605aa	ENSDARP00000154642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QHN6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000063714.7	rapgef6-201	1803	600aa	ENSDARP00000063713.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8C9	-

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Summary

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