Gene: odc1 ENSDARG00000007377

Description

ornithine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-010816-1]

Gene Synonyms

CHUNP6922, fc54f04, fi06d08, odc, ornithine decarboxylase, wu:fc54f04, wu:fi06d08

Location

Chromosome 17: 51,743,908-51,760,243 forward strand.

GRCz11:CM002901.2

About this gene

This gene has 5 transcripts (splice variants), 281 orthologues, 2 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149039.3	odc1-202	2140	461aa	ENSDARP00000124918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DGJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190955.1	odc1-205	4967	461aa	ENSDARP00000150138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DGJ4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184230.1	odc1-204	1434	461aa	ENSDARP00000154168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DGJ4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149807.2	odc1-203	734	116aa	ENSDARP00000123821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W507	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148869.2	odc1-201	545	31aa	ENSDARP00000124766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2D7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: odc1 ENSDARG00000007377

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Gene: odc1 ENSDARG00000007377

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