Gene: thraa ENSDARG00000000151

Description

thyroid hormone receptor alpha a [Source:NCBI gene;Acc:30670]

Gene Synonyms

NR1A1-A, TR[a]1, c-erbA, nr1a1, nr1a1a, thra, thral, tra, tra1, wu:fb59g07

Location

Chromosome 3: 34,688,022-34,753,605 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 5 transcripts (splice variants), 400 orthologues, 28 paralogues and is associated with 69 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000000160.10	thraa-201	2292	427aa	ENSDARP00000000160.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQG7 Q98867	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000151127.3	thraa-202	1470	409aa	ENSDARP00000125835.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISF8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000177021.2	thraa-205	1324	427aa	ENSDARP00000143608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQG7 Q98867	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000151633.2	thraa-204	334	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000151575.2	thraa-203	651	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: thraa ENSDARG00000000151

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Gene: thraa ENSDARG00000000151

Summary

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