Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ptprdb ENSDARG00000019945

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Description

protein tyrosine phosphatase receptor type Db [Source:ZFIN;Acc:ZDB-GENE-070615-38]

Gene Synonyms

ptprd, zgc:165626

Location

Chromosome 1: 19,122,920-19,237,612 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 5 transcripts (splice variants), 199 orthologues and 55 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127145.4	ptprdb-201	1140	205aa	ENSDARP00000110458.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000131579.3	ptprdb-202	6806	1934aa	ENSDARP00000122737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5J5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162949.2	ptprdb-204	5805	1934aa	ENSDARP00000134692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5J5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170680.2	ptprdb-205	4548	1515aa	ENSDARP00000140523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXV2	-
ENSDART00000143663.2	ptprdb-203	957	205aa	ENSDARP00000115871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLI0	-

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Summary

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