Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: stum ENSDARG00000041915

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Description

stum, mechanosensory transduction mediator homolog [Source:NCBI gene (formerly Entrezgene);Acc:562918]

Location

Chromosome 20: 38,322,444-38,359,333 forward strand.

GRCz11:CM002904.2

About this gene

This gene has 4 transcripts (splice variants) and 193 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161741.2	stum-204	1296	128aa	ENSDARP00000141501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000132241.5	stum-201	1306	127aa	ENSDARP00000113643.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T6T9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000148936.3	stum-202	580	121aa	ENSDARP00000123709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T9N0	-
ENSDART00000149623.2	stum-203	540	124aa	ENSDARP00000124529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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