Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: acsl1a ENSDARG00000030514

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Description

acyl-CoA synthetase long chain family member 1a [Source:NCBI gene (formerly Entrezgene);Acc:555308]

Location

Chromosome 1: 17,537,451-17,587,552 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 4 transcripts (splice variants), 260 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039917.7	acsl1a-201	4370	697aa	ENSDARP00000039916.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JK22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125125.3	acsl1a-202	2925	697aa	ENSDARP00000105676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JK22	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146946.2	acsl1a-204	708	125aa	ENSDARP00000117283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131293.2	acsl1a-203	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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