Gene: vmp1 ENSDARG00000012450

Description

vacuole membrane protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:336789]

Location

GRCz11:CM002899.2

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues, 3 paralogues and is associated with 22 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000018461.10	vmp1-201	2135	406aa	ENSDARP00000004153.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6C7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000111753.3	vmp1-202	2060	406aa	ENSDARP00000098034.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6C7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129155.3	vmp1-203	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary