NLR family pyrin domain containing 1 [Source:VGNC Symbol;Acc:VGNC:12556]
Chromosome 17: 5,732,250-5,814,252 reverse strand.
Pan_tro_3.0:CM000331.3
This gene has 5 transcripts (splice variants), 94 orthologues and 23 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000015929.5 | NLRP1-202 | 4416 | 1471aa | ENSPTRP00000014740.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A663D8T6 H2QC06 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000087334.1 | NLRP1-203 | 4416 | 1471aa | ENSPTRP00000070139.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RZH6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000080774.1 | NLRP1-204 | 4326 | 1441aa | ENSPTRP00000074882.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2J8KQE1 A0A663DD62 | - |
| ENSPTRT00000087908.1 | NLRP1-205 | 4284 | 1427aa | ENSPTRP00000085665.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A663DAF3 K7C5P0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000107563.1 | NLRP1-201 | 4122 | 1373aa | ENSPTRP00000062732.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2J8KQB7 A0A6D2VUG5 | - |
