Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SMG6 ENSCJAG00000001820

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Description

SMG6 nonsense mediated mRNA decay factor [Source:UniProtKB Gene Name;Acc:A0A8I4A322]

Location

Primary_assembly 5: 62,027,919-62,263,027 forward strand.

mCalJac1.pat.X:CM021919.1

About this gene

This gene has 6 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000127957.1	SMG6-202	5103	1700aa	ENSCJAP00000080875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3W6V5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000147638.1	SMG6-203	4992	1663aa	ENSCJAP00000086521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I4A322	-
ENSCJAT00000133501.1	SMG6-204	4986	1661aa	ENSCJAP00000080338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3VVW1	-
ENSCJAT00000123585.1	SMG6-205	4890	1629aa	ENSCJAP00000091231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I4A3K3	-
ENSCJAT00000024205.4	SMG6-206	4797	1598aa	ENSCJAP00000022879.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8Y4D5	-
ENSCJAT00000132947.1	SMG6-201	4461	1486aa	ENSCJAP00000079632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3WEG3	-

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Summary

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