Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
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Supporting evidence
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Transcript: Y39A3CL.2.1 rimb-1-201

Description

Variant SH3 domain protein [Source:NCBI gene (formerly Entrezgene);Acc:189724]

Location

About this transcript

This transcript has 20 exons and is annotated with 53 domains and features.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y39A3CL.2.1	rimb-1-201	4368	1276aa	Y39A3CL.2.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N415	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Y39A3CL.2.2	rimb-1-202	4296	1276aa	Y39A3CL.2.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N415	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,368 bps, Translation length: 1,276 residues

Version

Y39A3CL.2.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase