Transcript: B0564.10a.1

Description

Homeobox domain-containing protein; Homeobox protein unc-30 [Source:NCBI gene;Acc:178265]

Location

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features and maps to 82 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
B0564.10a.1	-	1348	319aa	B0564.10a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P52906	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
B0564.10b.1	-	1231	323aa	B0564.10b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P52906	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
B0564.10c.1	-	558	185aa	B0564.10c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G2W8	-
B0564.10d.1	-	546	181aa	B0564.10d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G2W7	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,348 bps, Translation length: 319 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52906

Version

B0564.10a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase