Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: nipa-1 WBGene00021820

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Description

NIPA1 (NonImprinted in Prader-Willi/Angelman syndrome region 1) homolog [Source:NCBI gene;Acc:175418]

Location

Chromosome III: 3,112,428-3,127,124 reverse strand.

WBcel235:BX284603.4

About this gene

This gene has 2 transcripts (splice variants) and 549 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y53G8B.4a.1	-	1646	397aa	Y53G8B.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G4S7C7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Y53G8B.4b.1	-	1555	378aa	Y53G8B.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KFD2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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