Calponin-homology (CH) domain-containing protein [Source:NCBI gene;Acc:188527]
Chromosome III: 5,288,177-5,298,800 forward strand.
WBcel235:BX284603.4
This gene has 4 transcripts (splice variants), 475 orthologues and 12 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| T15B12.1a.2 | - | 2277 | 222aa | T15B12.1a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5ECY7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T15B12.1a.3 | - | 1326 | 222aa | T15B12.1a.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5ECY7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T15B12.1b.1 | - | 1302 | 432aa | T15B12.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G4SJU0 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| T15B12.1a.1 | - | 1237 | 222aa | T15B12.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5ECY7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
