PAS domain-containing protein; Period protein homolog lin-42 [Source:NCBI gene;Acc:173503]
Chromosome II: 1,233,236-1,252,359 reverse strand.
WBcel235:BX284602.5
This gene has 7 transcripts (splice variants) and 636 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| F47F6.1b.1 | - | 2753 | 597aa | F47F6.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q65ZG8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F47F6.1a.1 | - | 2320 | 297aa | F47F6.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q65ZG8 | - |
| F47F6.1d.1 | - | 1965 | 654aa | F47F6.1d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MAY5 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| F47F6.1c.1 | - | 1538 | 453aa | F47F6.1c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q65ZG8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F47F6.1f.1 | - | 1533 | 510aa | F47F6.1f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MBE1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F47F6.1e.1 | - | 1011 | 336aa | F47F6.1e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MAT8 | - |
| F47F6.1g.1 | - | 297 | 98aa | F47F6.1g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MCB3 | - |
