putative MFS-type transporter C09D4.1 [Source:NCBI gene;Acc:172203]
Chromosome I: 5,497,679-5,505,460 forward strand.
WBcel235:BX284601.5
This gene has 4 transcripts (splice variants), 540 orthologues and 7 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| C09D4.1a.1 | - | 2377 | 586aa | C09D4.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O01735 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| C09D4.1b.3 | - | 2039 | 475aa | C09D4.1b.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O01735 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C09D4.1b.1 | - | 2030 | 475aa | C09D4.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O01735 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C09D4.1b.2 | - | 1877 | 475aa | C09D4.1b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O01735 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
