Na-K-Cl Cotransporter homolog [Source:NCBI gene;Acc:3565648]
Chromosome IV: 14,107,656-14,124,056 reverse strand.
WBcel235:BX284604.4
This gene has 10 transcripts (splice variants), 1744 orthologues and 3 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| Y37A1C.1g.1 | - | 4229 | 1235aa | Y37A1C.1g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H8ESD5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y37A1C.1c.2 | - | 4206 | 1210aa | Y37A1C.1c.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EEQ4 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| Y37A1C.1g.2 | - | 4166 | 1235aa | Y37A1C.1g.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H8ESD5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y37A1C.1c.1 | - | 4086 | 1210aa | Y37A1C.1c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EEQ4 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| Y37A1C.1f.1 | - | 4063 | 1186aa | Y37A1C.1f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H8ESD4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y37A1C.1h.1 | - | 4062 | 1188aa | Y37A1C.1h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | L8E912 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y37A1C.1a.1 | - | 2948 | 972aa | Y37A1C.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EFE5 | - |
| Y37A1C.1d.1 | - | 2613 | 870aa | Y37A1C.1d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9P897 | - |
| Y37A1C.1e.1 | - | 1647 | 548aa | Y37A1C.1e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9P898 | - |
| Y37A1C.1b.1 | nkcc-1-210 | 789 | 262aa | Y37A1C.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EFN5 | - |
