CNH domain-containing protein; Vacuolar protein sorting-associated [Source:NCBI gene;Acc:179902]
Chromosome V: 14,034,323-14,038,378 reverse strand.
WBcel235:BX284605.5
This gene has 4 transcripts (splice variants) and 210 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| T08G5.5b.1 | - | 3074 | 926aa | T08G5.5b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q1ZXS5 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| T08G5.5d.1 | - | 3065 | 923aa | T08G5.5d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A486WXM5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T08G5.5a.1 | - | 3059 | 923aa | T08G5.5a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q1ZXS5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| T08G5.5c.1 | - | 3057 | 920aa | T08G5.5c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q1ZXS5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
