Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: smg-8 WBGene00010551

Description

Protein SMG8; Protein smg-8 [Source:NCBI gene;Acc:175103]

Location

WBcel235:BX284602.5

About this gene

This gene has 3 transcripts (splice variants) and 210 orthologues.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
K04B12.3a.1	-	2744	873aa	K04B12.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O62301	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
K04B12.3b.1	-	2709	871aa	K04B12.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PEH8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
K04B12.3c.1	-	1068	355aa	K04B12.3c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PBA4	-

Summary