SMAll [Source:NCBI gene;Acc:179629]
Chromosome V: 11,899,449-11,916,623 forward strand.
WBcel235:BX284605.5
This gene has 6 transcripts (splice variants), 208 orthologues and 12 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| R31.1a.1 | - | 13098 | 4166aa | R31.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EFW3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| R31.1d.1 | - | 12570 | 3953aa | R31.1d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EBH3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| R31.1b.1 | - | 12192 | 4063aa | R31.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EC35 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| R31.1e.1 | - | 12171 | 4056aa | R31.1e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A486WUT8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| R31.1c.1 | - | 11943 | 3980aa | R31.1c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EG97 | - |
| R31.1f.1 | - | 11613 | 3870aa | R31.1f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A486WVF0 | - |
