Arf-GAP with ANK repeat and PH domain-containing protein cnt-2 [Source:NCBI gene;Acc:176490]
Chromosome III: 10,655,018-10,677,523 forward strand.
WBcel235:BX284603.4
This gene has 9 transcripts (splice variants), 5 orthologues and 4 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| Y39A1A.15a.1 | - | 3742 | 1107aa | Y39A1A.15a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9XX14 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| Y39A1A.15b.1 | - | 3330 | 951aa | Y39A1A.15b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9XX14 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y39A1A.15b.2 | - | 3233 | 951aa | Y39A1A.15b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9XX14 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y39A1A.15e.1 | - | 3204 | 873aa | Y39A1A.15e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBL4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y39A1A.15e.2 | - | 3121 | 873aa | Y39A1A.15e.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBL4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y39A1A.15c.1 | - | 3118 | 903aa | Y39A1A.15c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9XX14 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y39A1A.15e.3 | - | 3041 | 873aa | Y39A1A.15e.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBL4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y39A1A.15f.1 | - | 2930 | 742aa | Y39A1A.15f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RBL1 | - |
| Y39A1A.15g.1 | - | 2529 | 666aa | Y39A1A.15g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1X7RC73 | - |
