Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SMARCAL1 ENSATEG00000020624

.

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 [Ensembl NN prediction with score 100%]

Location

Primary_assembly 21: 14,329,769-14,338,829 reverse strand.

fAnaTes1.3:LR132057.1

About this gene

This gene has 5 transcripts (splice variants), 194 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSATET00000030325.3	SMARCAL1-203	3939	912aa	ENSATEP00000029870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1JA79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSATET00000069474.2	SMARCAL1-201	3566	854aa	ENSATEP00000065797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N6FJF0	-
ENSATET00000057881.2	SMARCAL1-202	3536	844aa	ENSATEP00000063977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N6BK19	-
ENSATET00000043683.1	SMARCAL1-205	2640	879aa	ENSATEP00000060959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N6BDB4	-
ENSATET00000069348.1	SMARCAL1-204	2298	765aa	ENSATEP00000040419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N6F750	-

.

Summary

.

.