Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UPF1 ENSATEG00000016606

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Description

UPF1 RNA helicase and ATPase [Ensembl NN prediction with score 100%]

Location

Primary_assembly 4: 17,757,059-17,769,435 forward strand.

fAnaTes1.3:LR132043.1

About this gene

This gene has 5 transcripts (splice variants), 203 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSATET00000024363.2	UPF1-203	3327	1107aa	ENSATEP00000023978.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1J1M4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSATET00000049368.2	UPF1-201	3511	1102aa	ENSATEP00000062204.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N6BFH5	-
ENSATET00000079242.1	UPF1-204	2274	756aa	ENSATEP00000076897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSATET00000079995.1	UPF1-202	924	307aa	ENSATEP00000072966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSATET00000076608.1	UPF1-205	858	284aa	ENSATEP00000075920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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