Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SMG5 ENSATEG00000005348

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Description

SMG5 nonsense mediated mRNA decay factor [Ensembl NN prediction with score 100%]

Location

Primary_assembly 16: 4,951,909-4,968,731 forward strand.

fAnaTes1.3:LR132055.1

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSATET00000007869.3	SMG5-203	4554	1117aa	ENSATEP00000007742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1HGC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSATET00000007888.3	SMG5-201	4281	1026aa	ENSATEP00000007761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1IVT9	-
ENSATET00000049113.2	SMG5-202	4242	1013aa	ENSATEP00000054434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N6AV42	-
ENSATET00000038891.2	SMG5-204	4236	1011aa	ENSATEP00000061769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N6BEW6	-

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Summary

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