Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UPF1 ENSAOCG00000006352

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Description

UPF1 RNA helicase and ATPase [Ensembl NN prediction with score 100%]

Location

Primary_assembly 2: 22,876,565-22,888,851 reverse strand.

ASM2253959v1:CM040062.1

About this gene

This gene has 7 transcripts (splice variants), 203 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSAOCT00000010399.2	UPF1-203	3535	1101aa	ENSAOCP00000021516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1CQL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSAOCT00000038592.1	UPF1-207	3634	1003aa	ENSAOCP00000048724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000010438.2	UPF1-204	3394	1054aa	ENSAOCP00000021460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1C453	-
ENSAOCT00000072020.1	UPF1-201	3192	1062aa	ENSAOCP00000066112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000071568.1	UPF1-205	2485	751aa	ENSAOCP00000037729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000066783.1	UPF1-206	1108	302aa	ENSAOCP00000056535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSAOCT00000040957.1	UPF1-202	1057	284aa	ENSAOCP00000073520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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